Datasetexpression_mean_normalized_with_dChip_geneAvg_Mar1014_PNs.mainSample.cls
#wt_versus_radiation.mainSample.cls
#wt_versus_radiation_repos
PhenotypemainSample.cls#wt_versus_radiation_repos
Upregulated in class1
GeneSetBCAT.100_UP.V1_DN
Enrichment Score (ES)0.42764217
Normalized Enrichment Score (NES)1.4485918
Nominal p-value0.01443299
FDR q-value0.048481576
FWER p-Value0.406
Table: GSEA Results Summary



Fig 1: Enrichment plot: BCAT.100_UP.V1_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1IGFBP5NAIGFBP5
Entrez,  Source
insulin-like growth factor binding protein 5103.9870.1739Yes
2KLHL4NAKLHL4
Entrez,  Source
kelch-like 4 (Drosophila)5382.7340.2741Yes
3FAM46ANAFAM46A
Entrez,  Source
family with sequence similarity 46, member A23901.5530.2742Yes
4SNAI2NASNAI2
Entrez,  Source
snail homolog 2 (Drosophila)31381.2620.3020Yes
5ZNF711NAZNF711
Entrez,  Source
zinc finger protein 71133651.1950.3459Yes
6AMHNAAMH
Entrez,  Source
anti-Mullerian hormone33661.1950.3981Yes
7KIAA0319LNAKIAA0319L
Entrez,  Source
KIAA0319-like48830.7700.3763Yes
8C10orf10NAC10ORF10
Entrez,  Source
chromosome 10 open reading frame 1053460.6510.3878Yes
9KLF10NAKLF10
Entrez,  Source
Kruppel-like factor 1057340.5730.3987Yes
10CCDC53NACCDC53
Entrez,  Source
coiled-coil domain containing 5357640.5670.4224Yes
11CDH12NACDH12
Entrez,  Source
cadherin 12, type 2 (N-cadherin 2)69320.4040.3973Yes
12C5orf42NA72570.3700.4016Yes
13TTRNATTR
Entrez,  Source
transthyretin (prealbumin, amyloidosis type I)73620.3590.4135Yes
14TLN2NATLN2
Entrez,  Source
talin 273990.3540.4276Yes
15B9D2NA93990.2080.3635No
16WISP3NAWISP3
Entrez,  Source
WNT1 inducible signaling pathway protein 397110.1930.3605No
17TMPRSS2NATMPRSS2
Entrez,  Source
transmembrane protease, serine 2106050.1510.3344No
18TBX5NATBX5
Entrez,  Source
T-box 5118890.0940.2915No
19DOCK3NADOCK3
Entrez,  Source
dedicator of cytokinesis 3123470.0770.2781No
20DSG3NADSG3
Entrez,  Source
desmoglein 3 (pemphigus vulgaris antigen)128770.0580.2613No
21GLRA2NAGLRA2
Entrez,  Source
glycine receptor, alpha 2136410.0280.2346No
22SERGEFNASERGEF
Entrez,  Source
secretion regulating guanine nucleotide exchange factor141170.0110.2176No
23PMCHNAPMCH
Entrez,  Source
pro-melanin-concentrating hormone14894-0.0170.1899No
24SLMO1NA15272-0.0320.1775No
25KRTAP4-7NAKRTAP4-7
Entrez,  Source
keratin associated protein 4-715401-0.0370.1744No
26HCG26NAHCG26
Entrez,  Source
HLA complex group 2616974-0.1000.1212No
27DAZLNADAZL
Entrez,  Source
deleted in azoospermia-like17701-0.1340.1005No
28LOC654056NALOC654056
Entrez,  Source
-18774-0.2080.0703No
29CHRNA2NACHRNA2
Entrez,  Source
cholinergic receptor, nicotinic, alpha 2 (neuronal)18918-0.2190.0747No
30PIPNAPIP
Entrez,  Source
prolactin-induced protein19201-0.2440.0750No
31PARK2NAPARK2
Entrez,  Source
Parkinson disease (autosomal recessive, juvenile) 2, parkin19405-0.2600.0790No
32NAT6NANAT6
Entrez,  Source
N-acetyltransferase 619406-0.2610.0904No
33C22orf46NA19678-0.2870.0930No
34KRT32NAKRT32
Entrez,  Source
keratin 3220627-0.3960.0756No
35FZD4NAFZD4
Entrez,  Source
frizzled homolog 4 (Drosophila)21953-0.6200.0541No
36ZNF749NAZNF749
Entrez,  Source
zinc finger protein 74922020-0.6320.0793No
37EXOC3NAEXOC3
Entrez,  Source
exocyst complex component 324715-1.3150.0381No
38RALGPS2NARALGPS2
Entrez,  Source
Ral GEF with PH domain and SH3 binding motif 224724-1.3180.0954No
Table: GSEA details [plain text format]



Fig 2: BCAT.100_UP.V1_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BCAT.100_UP.V1_DN: Random ES distribution   
Gene set null distribution of ES for BCAT.100_UP.V1_DN