Datasetexpression_mean_normalized_with_dChip_geneAvg_Mar1014_PNs.mainSample.cls
#wt_versus_radiation.mainSample.cls
#wt_versus_radiation_repos
PhenotypemainSample.cls#wt_versus_radiation_repos
Upregulated in class2
GeneSetBCAT_GDS748_DN
Enrichment Score (ES)-0.3773706
Normalized Enrichment Score (NES)-1.247063
Nominal p-value0.14007781
FDR q-value0.20662214
FWER p-Value0.852
Table: GSEA Results Summary



Fig 1: Enrichment plot: BCAT_GDS748_DN   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1GAS1NAGAS1
Entrez,  Source
growth arrest-specific 114.3180.0763No
2BMPR1ANABMPR1A
Entrez,  Source
bone morphogenetic protein receptor, type IA5872.6870.1023No
3TCF25NATCF25
Entrez,  Source
transcription factor 25 (basic helix-loop-helix)12982.1020.1135No
4ACAD8NAACAD8
Entrez,  Source
acyl-Coenzyme A dehydrogenase family, member 817201.8630.1310No
5FAM46ANAFAM46A
Entrez,  Source
family with sequence similarity 46, member A23901.5530.1339No
6MLH1NAMLH1
Entrez,  Source
mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli)25791.4700.1530No
7SNAI2NASNAI2
Entrez,  Source
snail homolog 2 (Drosophila)31381.2620.1548No
8SLC35E3NASLC35E3
Entrez,  Source
solute carrier family 35, member E332941.2160.1706No
9VPS13BNAVPS13B
Entrez,  Source
vacuolar protein sorting 13B (yeast)34271.1750.1866No
10ZNF273NAZNF273
Entrez,  Source
zinc finger protein 27336861.0860.1963No
11ZBED5NAZBED5
Entrez,  Source
zinc finger, BED-type containing 537411.0710.2132No
12CELSR1NACELSR1
Entrez,  Source
cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)39600.9980.2229No
13CDK5RAP3NACDK5RAP3
Entrez,  Source
CDK5 regulatory subunit associated protein 339820.9910.2396No
14UROSNAUROS
Entrez,  Source
uroporphyrinogen III synthase (congenital erythropoietic porphyria)45670.8470.2332No
15ARL6IP1NAARL6IP1
Entrez,  Source
ADP-ribosylation factor-like 6 interacting protein 148140.7850.2381No
16EXOC2NAEXOC2
Entrez,  Source
exocyst complex component 257660.5670.2132No
17CHMP4ANACHMP4A
Entrez,  Source
chromatin modifying protein 4A62580.4880.2039No
18C5orf42NA72570.3700.1738No
19TTRNATTR
Entrez,  Source
transthyretin (prealbumin, amyloidosis type I)73620.3590.1763No
20COL2A1NACOL2A1
Entrez,  Source
collagen, type II, alpha 1 (primary osteoarthritis, spondyloepiphyseal dysplasia, congenital)74530.3490.1792No
21RALYNARALY
Entrez,  Source
RNA binding protein, autoantigenic (hnRNP-associated with lethal yellow homolog (mouse))98400.1860.0951No
22RPS6KA5NARPS6KA5
Entrez,  Source
ribosomal protein S6 kinase, 90kDa, polypeptide 5122560.0810.0080No
23DDIT4NADDIT4
Entrez,  Source
DNA-damage-inducible transcript 4130100.053-0.0187No
24HSDL2NAHSDL2
Entrez,  Source
hydroxysteroid dehydrogenase like 2131230.048-0.0219No
25PBLDNA137980.022-0.0462No
26ADAMTS20NAADAMTS20
Entrez,  Source
ADAM metallopeptidase with thrombospondin type 1 motif, 2018404-0.178-0.2118No
27LOC654056NALOC654056
Entrez,  Source
-18774-0.208-0.2217No
28HMG20BNAHMG20B
Entrez,  Source
high-mobility group 20B21329-0.502-0.3064No
29RDH5NARDH5
Entrez,  Source
retinol dehydrogenase 5 (11-cis/9-cis)22170-0.660-0.3255No
30PMFBP1NAPMFBP1
Entrez,  Source
polyamine modulated factor 1 binding protein 122349-0.696-0.3198No
31SKP2NASKP2
Entrez,  Source
S-phase kinase-associated protein 2 (p45)23129-0.864-0.3330No
32ZNF32NAZNF32
Entrez,  Source
zinc finger protein 3224158-1.138-0.3506Yes
33PABPC3NAPABPC3
Entrez,  Source
poly(A) binding protein, cytoplasmic 324445-1.225-0.3394Yes
34ISYNA1NAISYNA1
Entrez,  Source
-25481-1.631-0.3485Yes
35MYBL1NAMYBL1
Entrez,  Source
v-myb myeloblastosis viral oncogene homolog (avian)-like 125746-1.764-0.3270Yes
36LAP3NALAP3
Entrez,  Source
leucine aminopeptidase 325812-1.803-0.2975Yes
37PDHA1NAPDHA1
Entrez,  Source
pyruvate dehydrogenase (lipoamide) alpha 125871-1.839-0.2672Yes
38CNPY3NA26363-2.182-0.2466Yes
39HLXNA26424-2.232-0.2094Yes
40ZNF318NAZNF318
Entrez,  Source
zinc finger protein 31826574-2.359-0.1731Yes
41SLC27A6NASLC27A6
Entrez,  Source
solute carrier family 27 (fatty acid transporter), member 626703-2.509-0.1335Yes
42BASP1NABASP1
Entrez,  Source
brain abundant, membrane attached signal protein 127223-3.935-0.0829Yes
43KLHL9NAKLHL9
Entrez,  Source
kelch-like 9 (Drosophila)27327-4.9110.0001Yes
Table: GSEA details [plain text format]



Fig 2: BCAT_GDS748_DN   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: BCAT_GDS748_DN: Random ES distribution   
Gene set null distribution of ES for BCAT_GDS748_DN