Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List
| Dataset | expression_mean_normalized_with_dChip_geneAvg_Mar1014_PNs.mainSample.cls #wt_versus_radiation.mainSample.cls #wt_versus_radiation_repos |
| Phenotype | mainSample.cls#wt_versus_radiation_repos |
| Upregulated in class | 1 |
| GeneSet | GLI1_UP.V1_UP |
| Enrichment Score (ES) | 0.49715552 |
| Normalized Enrichment Score (NES) | 1.4538412 |
| Nominal p-value | 0.03131524 |
| FDR q-value | 0.04842102 |
| FWER p-Value | 0.387 |
| PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
|---|---|---|---|---|---|---|---|---|
| 1 | CSGALNACT1 | NA | 212 | 3.248 | 0.0913 | Yes | ||
| 2 | FEM1A | NA | FEM1A Entrez, Source | fem-1 homolog a (C.elegans) | 529 | 2.744 | 0.1633 | Yes |
| 3 | LMO7 | NA | LMO7 Entrez, Source | LIM domain 7 | 599 | 2.677 | 0.2424 | Yes |
| 4 | CCND2 | NA | CCND2 Entrez, Source | cyclin D2 | 785 | 2.489 | 0.3116 | Yes |
| 5 | C16orf45 | NA | C16ORF45 Entrez, Source | chromosome 16 open reading frame 45 | 1058 | 2.275 | 0.3709 | Yes |
| 6 | ZBTB16 | NA | ZBTB16 Entrez, Source | zinc finger and BTB domain containing 16 | 1236 | 2.142 | 0.4298 | Yes |
| 7 | WEE1 | NA | WEE1 Entrez, Source | WEE1 homolog (S. pombe) | 2443 | 1.528 | 0.4322 | Yes |
| 8 | PLXNA2 | NA | PLXNA2 Entrez, Source | plexin A2 | 2581 | 1.470 | 0.4720 | Yes |
| 9 | PTH1R | NA | 3116 | 1.272 | 0.4912 | Yes | ||
| 10 | C7orf50 | NA | 3822 | 1.043 | 0.4972 | Yes | ||
| 11 | SGTA | NA | SGTA Entrez, Source | small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha | 6047 | 0.519 | 0.4315 | No |
| 12 | IGJ | NA | IGJ Entrez, Source | immunoglobulin J polypeptide, linker protein for immunoglobulin alpha and mu polypeptides | 6843 | 0.414 | 0.4150 | No |
| 13 | POFUT2 | NA | POFUT2 Entrez, Source | protein O-fucosyltransferase 2 | 7668 | 0.329 | 0.3949 | No |
| 14 | TXNDC12 | NA | TXNDC12 Entrez, Source | thioredoxin domain containing 12 (endoplasmic reticulum) | 8029 | 0.298 | 0.3908 | No |
| 15 | PRKD3 | NA | PRKD3 Entrez, Source | protein kinase D3 | 9333 | 0.212 | 0.3495 | No |
| 16 | YBX1 | NA | YBX1 Entrez, Source | Y box binding protein 1 | 14716 | -0.010 | 0.1527 | No |
| 17 | TRIM23 | NA | TRIM23 Entrez, Source | tripartite motif-containing 23 | 15188 | -0.029 | 0.1363 | No |
| 18 | PPT2 | NA | PPT2 Entrez, Source | palmitoyl-protein thioesterase 2 | 17121 | -0.107 | 0.0688 | No |
| 19 | M6PR | NA | M6PR Entrez, Source | mannose-6-phosphate receptor (cation dependent) | 19967 | -0.317 | -0.0258 | No |
| 20 | STAU1 | NA | STAU1 Entrez, Source | staufen, RNA binding protein, homolog 1 (Drosophila) | 20458 | -0.375 | -0.0323 | No |
| 21 | ZC3H18 | NA | 21889 | -0.607 | -0.0661 | No | ||
| 22 | TMOD3 | NA | TMOD3 Entrez, Source | tropomodulin 3 (ubiquitous) | 23464 | -0.943 | -0.0950 | No |
| 23 | IFT74 | NA | IFT74 Entrez, Source | intraflagellar transport 74 homolog (Chlamydomonas) | 24528 | -1.255 | -0.0957 | No |
| 24 | HLA-DQB1 | NA | HLA-DQB1 Entrez, Source | major histocompatibility complex, class II, DQ beta 1 | 24836 | -1.356 | -0.0656 | No |
| 25 | IGFBP6 | NA | IGFBP6 Entrez, Source | insulin-like growth factor binding protein 6 | 24977 | -1.407 | -0.0278 | No |
| 26 | SAR1A | NA | SAR1A Entrez, Source | SAR1 gene homolog A (S. cerevisiae) | 25000 | -1.419 | 0.0146 | No |
| 27 | PPAPDC2 | NA | PPAPDC2 Entrez, Source | phosphatidic acid phosphatase type 2 domain containing 2 | 26524 | -2.317 | 0.0295 | No |
