Datasetexpression_mean_normalized_with_dChip_geneAvg_Mar1014_PNs.mainSample.cls
#wt_versus_radiation.mainSample.cls
#wt_versus_radiation_repos
PhenotypemainSample.cls#wt_versus_radiation_repos
Upregulated in class2
GeneSetPOSITIVE_REGULATION_OF_CELL_PROLIFERATION
Enrichment Score (ES)-0.39909098
Normalized Enrichment Score (NES)-1.5944297
Nominal p-value0.0
FDR q-value0.21408892
FWER p-Value0.555
Table: GSEA Results Summary



Fig 1: Enrichment plot: POSITIVE_REGULATION_OF_CELL_PROLIFERATION   
Profile of the Running ES Score & Positions of GeneSet Members on the Rank Ordered List

PROBEDESCRIPTION
(from dataset)
GENE SYMBOLGENE_TITLERANK IN GENE LISTRANK METRIC SCORERUNNING ESCORE ENRICHMENT
1PTNNAPTN
Entrez,  Source
pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1)183.8980.0235No
2VEGFANA1623.3310.0389No
3PDGFANAPDGFA
Entrez,  Source
platelet-derived growth factor alpha polypeptide1953.2790.0581No
4NCK2NANCK2
Entrez,  Source
NCK adaptor protein 24152.9060.0681No
5LAMC1NALAMC1
Entrez,  Source
laminin, gamma 1 (formerly LAMB2)6642.6070.0752No
6CDK6NACDK6
Entrez,  Source
cyclin-dependent kinase 67742.4960.0866No
7S1PR2NA9162.3780.0962No
8CD81NACD81
Entrez,  Source
CD81 molecule16401.9000.0814No
9S1PR3NA16591.8930.0925No
10TGFBR1NATGFBR1
Entrez,  Source
transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa)17171.8640.1020No
11NDUFS4NANDUFS4
Entrez,  Source
NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase)19691.7410.1035No
12SCG2NASCG2
Entrez,  Source
secretogranin II (chromogranin C)24971.5060.0935No
13DHPSNADHPS
Entrez,  Source
deoxyhypusine synthase25991.4600.0988No
14POU3F2NAPOU3F2
Entrez,  Source
POU domain, class 3, transcription factor 226841.4280.1046No
15ERBB2NAERBB2
Entrez,  Source
v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian)27101.4180.1125No
16CIAO1NA28571.3650.1156No
17CDKN1ANACDKN1A
Entrez,  Source
cyclin-dependent kinase inhibitor 1A (p21, Cip1)31681.2500.1119No
18VEGFBNAVEGFB
Entrez,  Source
vascular endothelial growth factor B33891.1880.1112No
19CD276NACD276
Entrez,  Source
CD276 molecule34111.1800.1178No
20TSPAN31NATSPAN31
Entrez,  Source
tetraspanin 3134421.1710.1239No
21EDN1NAEDN1
Entrez,  Source
endothelin 138041.0490.1172No
22PTK2BNAPTK2B
Entrez,  Source
PTK2B protein tyrosine kinase 2 beta38421.0370.1222No
23CHRM1NACHRM1
Entrez,  Source
cholinergic receptor, muscarinic 139241.0110.1255No
24FGF7NAFGF7
Entrez,  Source
fibroblast growth factor 7 (keratinocyte growth factor)41200.9530.1243No
25TBX2NATBX2
Entrez,  Source
T-box 241360.9500.1296No
26IGF1NAIGF1
Entrez,  Source
insulin-like growth factor 1 (somatomedin C)41650.9410.1344No
27GLI1NAGLI1
Entrez,  Source
glioma-associated oncogene homolog 1 (zinc finger protein)42010.9310.1389No
28CHRNA7NACHRNA7
Entrez,  Source
cholinergic receptor, nicotinic, alpha 742140.9270.1442No
29IL6NAIL6
Entrez,  Source
interleukin 6 (interferon, beta 2)42160.9270.1499No
30LAMB1NALAMB1
Entrez,  Source
laminin, beta 142920.9080.1528No
31CDC7NACDC7
Entrez,  Source
CDC7 cell division cycle 7 (S. cerevisiae)43530.8940.1562No
32TGFB2NATGFB2
Entrez,  Source
transforming growth factor, beta 244140.8800.1594No
33CDK2NACDK2
Entrez,  Source
cyclin-dependent kinase 249270.7590.1453No
34ELANENA49850.7460.1478No
35CLEC11ANACLEC11A
Entrez,  Source
C-type lectin domain family 11, member A50270.7380.1509No
36TGFANATGFA
Entrez,  Source
transforming growth factor, alpha51320.7120.1515No
37TDGF1NATDGF1
Entrez,  Source
teratocarcinoma-derived growth factor 153350.6520.1481No
38IGF1RNAIGF1R
Entrez,  Source
insulin-like growth factor 1 receptor53500.6500.1516No
39CDK4NACDK4
Entrez,  Source
cyclin-dependent kinase 455820.6000.1468No
40VIPR1NAVIPR1
Entrez,  Source
vasoactive intestinal peptide receptor 157570.5690.1440No
41IL21NAIL21
Entrez,  Source
interleukin 2162630.4870.1284No
42SERTAD1NASERTAD1
Entrez,  Source
SERTA domain containing 162870.4830.1306No
43STAMBPNASTAMBP
Entrez,  Source
STAM binding protein68390.4140.1129No
44CSF1NACSF1
Entrez,  Source
colony stimulating factor 1 (macrophage)68520.4120.1150No
45NCK1NANCK1
Entrez,  Source
NCK adaptor protein 168630.4120.1172No
46VIPNAVIP
Entrez,  Source
vasoactive intestinal peptide70190.3950.1139No
47TNFSF4NATNFSF4
Entrez,  Source
tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa)74800.3460.0992No
48ADRA1DNAADRA1D
Entrez,  Source
adrenergic, alpha-1D-, receptor81360.2890.0769No
49PRTN3NAPRTN3
Entrez,  Source
proteinase 3 (serine proteinase, neutrophil, Wegener granulomatosis autoantigen)82350.2830.0750No
50FGF4NAFGF4
Entrez,  Source
fibroblast growth factor 4 (heparin secretory transforming protein 1, Kaposi sarcoma oncogene)84250.2680.0697No
51IL2NAIL2
Entrez,  Source
interleukin 285750.2580.0658No
52MARK4NAMARK4
Entrez,  Source
MAP/microtubule affinity-regulating kinase 490720.2260.0490No
53CCKBRNACCKBR
Entrez,  Source
cholecystokinin B receptor94210.2070.0375No
54AGGF1NAAGGF1
Entrez,  Source
angiogenic factor with G patch and FHA domains 197210.1920.0277No
55CAPNS1NACAPNS1
Entrez,  Source
calpain, small subunit 1101300.1730.0137No
56TSHRNATSHR
Entrez,  Source
thyroid stimulating hormone receptor101370.1730.0146No
57CXCL10NACXCL10
Entrez,  Source
chemokine (C-X-C motif) ligand 10106920.147-0.0049No
58FLT3NAFLT3
Entrez,  Source
fms-related tyrosine kinase 3107140.146-0.0047No
59SPDYANASPDYA
Entrez,  Source
speedy homolog A (Drosophila)110180.131-0.0151No
60FLT1NAFLT1
Entrez,  Source
fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor)117460.100-0.0412No
61TBRG4NATBRG4
Entrez,  Source
transforming growth factor beta regulator 4118630.095-0.0449No
62IL4NAIL4
Entrez,  Source
interleukin 4120030.090-0.0494No
63IL12BNAIL12B
Entrez,  Source
interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40)123290.078-0.0609No
64CD28NACD28
Entrez,  Source
CD28 molecule123510.077-0.0612No
65FGF10NAFGF10
Entrez,  Source
fibroblast growth factor 10127720.061-0.0763No
66IL12RB1NAIL12RB1
Entrez,  Source
interleukin 12 receptor, beta 1130250.052-0.0852No
67CDC25BNACDC25B
Entrez,  Source
cell division cycle 25B131040.049-0.0878No
68CCL14NACCL14
Entrez,  Source
chemokine (C-C motif) ligand 14140520.013-0.1225No
69ADRA2ANAADRA2A
Entrez,  Source
adrenergic, alpha-2A-, receptor143120.004-0.1320No
70IL18NAIL18
Entrez,  Source
interleukin 18 (interferon-gamma-inducing factor)14572-0.005-0.1415No
71IL3NAIL3
Entrez,  Source
interleukin 3 (colony-stimulating factor, multiple)14741-0.011-0.1477No
72ALOX12NAALOX12
Entrez,  Source
arachidonate 12-lipoxygenase15059-0.024-0.1592No
73DERL2NADERL2
Entrez,  Source
Der1-like domain family, member 215507-0.041-0.1754No
74MST1RNAMST1R
Entrez,  Source
macrophage stimulating 1 receptor (c-met-related tyrosine kinase)15560-0.043-0.1770No
75IL12RB2NAIL12RB2
Entrez,  Source
interleukin 12 receptor, beta 215979-0.058-0.1920No
76PTPRCNAPTPRC
Entrez,  Source
protein tyrosine phosphatase, receptor type, C15992-0.059-0.1921No
77HTR1ANAHTR1A
Entrez,  Source
5-hydroxytryptamine (serotonin) receptor 1A16041-0.062-0.1935No
78CD86NACD86
Entrez,  Source
CD86 molecule16937-0.099-0.2258No
79CD3ENACD3E
Entrez,  Source
CD3e molecule, epsilon (CD3-TCR complex)17403-0.120-0.2422No
80CUL3NACUL3
Entrez,  Source
cullin 318027-0.155-0.2641No
81IL9NAIL9
Entrez,  Source
interleukin 918039-0.155-0.2636No
82TNFSF13BNATNFSF13B
Entrez,  Source
tumor necrosis factor (ligand) superfamily, member 13b18160-0.162-0.2670No
83SLAMF1NASLAMF1
Entrez,  Source
signaling lymphocytic activation molecule family member 118553-0.189-0.2802No
84HCLS1NAHCLS1
Entrez,  Source
hematopoietic cell-specific Lyn substrate 118598-0.193-0.2806No
85EBI3NAEBI3
Entrez,  Source
Epstein-Barr virus induced gene 318886-0.216-0.2898No
86EREGNAEREG
Entrez,  Source
epiregulin19078-0.233-0.2954No
87TIPINNATIPIN
Entrez,  Source
TIMELESS interacting protein19273-0.249-0.3010No
88EPGNNA19307-0.252-0.3007No
89GLP2RNAGLP2R
Entrez,  Source
glucagon-like peptide 2 receptor19551-0.275-0.3079No
90SSR1NASSR1
Entrez,  Source
signal sequence receptor, alpha (translocon-associated protein alpha)19825-0.302-0.3161No
91FGF18NAFGF18
Entrez,  Source
fibroblast growth factor 1819855-0.306-0.3152No
92TBC1D8NATBC1D8
Entrez,  Source
TBC1 domain family, member 8 (with GRAM domain)20389-0.366-0.3326No
93REG1ANAREG1A
Entrez,  Source
regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein)20526-0.383-0.3352No
94SIRPGNASIRPG
Entrez,  Source
signal-regulatory protein gamma20821-0.425-0.3434No
95ANGNAANG
Entrez,  Source
angiogenin, ribonuclease, RNase A family, 521162-0.475-0.3529No
96DDX11NADDX11
Entrez,  Source
DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)21615-0.554-0.3661No
97NAMPTNA21680-0.566-0.3650No
98NAP1L1NANAP1L1
Entrez,  Source
nucleosome assembly protein 1-like 121785-0.588-0.3651No
99RHOGNARHOG
Entrez,  Source
ras homolog gene family, member G (rho G)22134-0.653-0.3739No
100NME1NANME1
Entrez,  Source
non-metastatic cells 1, protein (NM23A) expressed in22287-0.685-0.3752No
101TNFSF13NATNFSF13
Entrez,  Source
tumor necrosis factor (ligand) superfamily, member 1322312-0.689-0.3718No
102EGR4NAEGR4
Entrez,  Source
early growth response 422845-0.805-0.3864No
103FLT3LGNAFLT3LG
Entrez,  Source
fms-related tyrosine kinase 3 ligand22969-0.833-0.3858No
104CDH13NACDH13
Entrez,  Source
cadherin 13, H-cadherin (heart)23118-0.862-0.3859No
105CDC123NA23182-0.874-0.3827No
106FIGFNAFIGF
Entrez,  Source
c-fos induced growth factor (vascular endothelial growth factor D)23302-0.902-0.3815No
107LAMA1NALAMA1
Entrez,  Source
laminin, alpha 123715-1.011-0.3904No
108BMI1NABMI1
Entrez,  Source
B lymphoma Mo-MLV insertion region (mouse)23952-1.077-0.3924Yes
109TIMP1NATIMP1
Entrez,  Source
TIMP metallopeptidase inhibitor 124033-1.098-0.3885Yes
110CD24NACD24
Entrez,  Source
CD24 molecule24149-1.134-0.3857Yes
111IL31RANAIL31RA
Entrez,  Source
interleukin 31 receptor A24163-1.138-0.3791Yes
112IL11NAIL11
Entrez,  Source
interleukin 1124169-1.140-0.3723Yes
113LRP5NALRP5
Entrez,  Source
low density lipoprotein receptor-related protein 524383-1.206-0.3726Yes
114CSF3NACSF3
Entrez,  Source
colony stimulating factor 3 (granulocyte)24446-1.225-0.3673Yes
115MATKNAMATK
Entrez,  Source
megakaryocyte-associated tyrosine kinase24462-1.229-0.3602Yes
116BTCNABTC
Entrez,  Source
betacellulin24641-1.291-0.3587Yes
117CAPN1NACAPN1
Entrez,  Source
calpain 1, (mu/I) large subunit25062-1.444-0.3652Yes
118TTKNATTK
Entrez,  Source
TTK protein kinase25095-1.459-0.3573Yes
119DNAJA2NADNAJA2
Entrez,  Source
DnaJ (Hsp40) homolog, subfamily A, member 225155-1.485-0.3503Yes
120MCTS1NAMCTS1
Entrez,  Source
malignant T cell amplified sequence 125232-1.514-0.3437Yes
121NOP2NA25418-1.600-0.3406Yes
122TGFBR2NATGFBR2
Entrez,  Source
transforming growth factor, beta receptor II (70/80kDa)25434-1.610-0.3311Yes
123TBX3NATBX3
Entrez,  Source
T-box 3 (ulnar mammary syndrome)25487-1.638-0.3229Yes
124TNFSF12NATNFSF12
Entrez,  Source
tumor necrosis factor (ligand) superfamily, member 1225648-1.710-0.3182Yes
125MYCNAMYC
Entrez,  Source
v-myc myelocytomatosis viral oncogene homolog (avian)25669-1.721-0.3082Yes
126LIFNALIF
Entrez,  Source
leukemia inhibitory factor (cholinergic differentiation factor)26070-1.959-0.3108Yes
127CTF1NACTF1
Entrez,  Source
cardiotrophin 126074-1.962-0.2987Yes
128NME2NANME2
Entrez,  Source
non-metastatic cells 2, protein (NM23B) expressed in26227-2.076-0.2914Yes
129ICOSLGNAICOSLG
Entrez,  Source
inducible T-cell co-stimulator ligand26404-2.216-0.2841Yes
130FOSL1NAFOSL1
Entrez,  Source
FOS-like antigen 126452-2.259-0.2718Yes
131TNFRSF11ANATNFRSF11A
Entrez,  Source
tumor necrosis factor receptor superfamily, member 11a, NFKB activator26627-2.414-0.2633Yes
132PGFNAPGF
Entrez,  Source
placental growth factor, vascular endothelial growth factor-related protein26662-2.458-0.2493Yes
133PTHLHNAPTHLH
Entrez,  Source
parathyroid hormone-like hormone26693-2.489-0.2349Yes
134FGFR1OPNAFGFR1OP
Entrez,  Source
FGFR1 oncogene partner26702-2.508-0.2196Yes
135HOXC10NAHOXC10
Entrez,  Source
homeobox C1026784-2.614-0.2064Yes
136TCIRG1NATCIRG1
Entrez,  Source
T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A326835-2.712-0.1914Yes
137CD47NACD47
Entrez,  Source
CD47 molecule26900-2.809-0.1763Yes
138NRP1NANRP1
Entrez,  Source
neuropilin 126913-2.831-0.1592Yes
139IL15NAIL15
Entrez,  Source
interleukin 1526930-2.867-0.1420Yes
140IL7NAIL7
Entrez,  Source
interleukin 726962-2.930-0.1249Yes
141FLT4NAFLT4
Entrez,  Source
fms-related tyrosine kinase 426982-2.982-0.1071Yes
142LYNNALYN
Entrez,  Source
v-yes-1 Yamaguchi sarcoma viral related oncogene homolog27040-3.155-0.0897Yes
143EGFRNAEGFR
Entrez,  Source
epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian)27106-3.388-0.0710Yes
144CXCL5NACXCL5
Entrez,  Source
chemokine (C-X-C motif) ligand 527183-3.696-0.0509Yes
145SPHK1NASPHK1
Entrez,  Source
sphingosine kinase 127260-4.236-0.0274Yes
146BNC1NABNC1
Entrez,  Source
basonuclin 127321-4.8150.0003Yes
Table: GSEA details [plain text format]



Fig 2: POSITIVE_REGULATION_OF_CELL_PROLIFERATION   
Blue-Pink O' Gram in the Space of the Analyzed GeneSet



Fig 3: POSITIVE_REGULATION_OF_CELL_PROLIFERATION: Random ES distribution   
Gene set null distribution of ES for POSITIVE_REGULATION_OF_CELL_PROLIFERATION