Dataset | expression_mean_normalized_with_dChip_geneAvg_Mar1014_PNs.mainSample.cls #wt_versus_radiation.mainSample.cls #wt_versus_radiation_repos |
Phenotype | mainSample.cls#wt_versus_radiation_repos |
Upregulated in class | 2 |
GeneSet | POSITIVE_REGULATION_OF_CELL_PROLIFERATION |
Enrichment Score (ES) | -0.39909098 |
Normalized Enrichment Score (NES) | -1.5944297 |
Nominal p-value | 0.0 |
FDR q-value | 0.21408892 |
FWER p-Value | 0.555 |
PROBE | DESCRIPTION (from dataset) | GENE SYMBOL | GENE_TITLE | RANK IN GENE LIST | RANK METRIC SCORE | RUNNING ES | CORE ENRICHMENT | |
---|---|---|---|---|---|---|---|---|
1 | PTN | NA | PTN Entrez,  Source | pleiotrophin (heparin binding growth factor 8, neurite growth-promoting factor 1) | 18 | 3.898 | 0.0235 | No |
2 | VEGFA | NA | 162 | 3.331 | 0.0389 | No | ||
3 | PDGFA | NA | PDGFA Entrez,  Source | platelet-derived growth factor alpha polypeptide | 195 | 3.279 | 0.0581 | No |
4 | NCK2 | NA | NCK2 Entrez,  Source | NCK adaptor protein 2 | 415 | 2.906 | 0.0681 | No |
5 | LAMC1 | NA | LAMC1 Entrez,  Source | laminin, gamma 1 (formerly LAMB2) | 664 | 2.607 | 0.0752 | No |
6 | CDK6 | NA | CDK6 Entrez,  Source | cyclin-dependent kinase 6 | 774 | 2.496 | 0.0866 | No |
7 | S1PR2 | NA | 916 | 2.378 | 0.0962 | No | ||
8 | CD81 | NA | CD81 Entrez,  Source | CD81 molecule | 1640 | 1.900 | 0.0814 | No |
9 | S1PR3 | NA | 1659 | 1.893 | 0.0925 | No | ||
10 | TGFBR1 | NA | TGFBR1 Entrez,  Source | transforming growth factor, beta receptor I (activin A receptor type II-like kinase, 53kDa) | 1717 | 1.864 | 0.1020 | No |
11 | NDUFS4 | NA | NDUFS4 Entrez,  Source | NADH dehydrogenase (ubiquinone) Fe-S protein 4, 18kDa (NADH-coenzyme Q reductase) | 1969 | 1.741 | 0.1035 | No |
12 | SCG2 | NA | SCG2 Entrez,  Source | secretogranin II (chromogranin C) | 2497 | 1.506 | 0.0935 | No |
13 | DHPS | NA | DHPS Entrez,  Source | deoxyhypusine synthase | 2599 | 1.460 | 0.0988 | No |
14 | POU3F2 | NA | POU3F2 Entrez,  Source | POU domain, class 3, transcription factor 2 | 2684 | 1.428 | 0.1046 | No |
15 | ERBB2 | NA | ERBB2 Entrez,  Source | v-erb-b2 erythroblastic leukemia viral oncogene homolog 2, neuro/glioblastoma derived oncogene homolog (avian) | 2710 | 1.418 | 0.1125 | No |
16 | CIAO1 | NA | 2857 | 1.365 | 0.1156 | No | ||
17 | CDKN1A | NA | CDKN1A Entrez,  Source | cyclin-dependent kinase inhibitor 1A (p21, Cip1) | 3168 | 1.250 | 0.1119 | No |
18 | VEGFB | NA | VEGFB Entrez,  Source | vascular endothelial growth factor B | 3389 | 1.188 | 0.1112 | No |
19 | CD276 | NA | CD276 Entrez,  Source | CD276 molecule | 3411 | 1.180 | 0.1178 | No |
20 | TSPAN31 | NA | TSPAN31 Entrez,  Source | tetraspanin 31 | 3442 | 1.171 | 0.1239 | No |
21 | EDN1 | NA | EDN1 Entrez,  Source | endothelin 1 | 3804 | 1.049 | 0.1172 | No |
22 | PTK2B | NA | PTK2B Entrez,  Source | PTK2B protein tyrosine kinase 2 beta | 3842 | 1.037 | 0.1222 | No |
23 | CHRM1 | NA | CHRM1 Entrez,  Source | cholinergic receptor, muscarinic 1 | 3924 | 1.011 | 0.1255 | No |
24 | FGF7 | NA | FGF7 Entrez,  Source | fibroblast growth factor 7 (keratinocyte growth factor) | 4120 | 0.953 | 0.1243 | No |
25 | TBX2 | NA | TBX2 Entrez,  Source | T-box 2 | 4136 | 0.950 | 0.1296 | No |
26 | IGF1 | NA | IGF1 Entrez,  Source | insulin-like growth factor 1 (somatomedin C) | 4165 | 0.941 | 0.1344 | No |
27 | GLI1 | NA | GLI1 Entrez,  Source | glioma-associated oncogene homolog 1 (zinc finger protein) | 4201 | 0.931 | 0.1389 | No |
28 | CHRNA7 | NA | CHRNA7 Entrez,  Source | cholinergic receptor, nicotinic, alpha 7 | 4214 | 0.927 | 0.1442 | No |
29 | IL6 | NA | IL6 Entrez,  Source | interleukin 6 (interferon, beta 2) | 4216 | 0.927 | 0.1499 | No |
30 | LAMB1 | NA | LAMB1 Entrez,  Source | laminin, beta 1 | 4292 | 0.908 | 0.1528 | No |
31 | CDC7 | NA | CDC7 Entrez,  Source | CDC7 cell division cycle 7 (S. cerevisiae) | 4353 | 0.894 | 0.1562 | No |
32 | TGFB2 | NA | TGFB2 Entrez,  Source | transforming growth factor, beta 2 | 4414 | 0.880 | 0.1594 | No |
33 | CDK2 | NA | CDK2 Entrez,  Source | cyclin-dependent kinase 2 | 4927 | 0.759 | 0.1453 | No |
34 | ELANE | NA | 4985 | 0.746 | 0.1478 | No | ||
35 | CLEC11A | NA | CLEC11A Entrez,  Source | C-type lectin domain family 11, member A | 5027 | 0.738 | 0.1509 | No |
36 | TGFA | NA | TGFA Entrez,  Source | transforming growth factor, alpha | 5132 | 0.712 | 0.1515 | No |
37 | TDGF1 | NA | TDGF1 Entrez,  Source | teratocarcinoma-derived growth factor 1 | 5335 | 0.652 | 0.1481 | No |
38 | IGF1R | NA | IGF1R Entrez,  Source | insulin-like growth factor 1 receptor | 5350 | 0.650 | 0.1516 | No |
39 | CDK4 | NA | CDK4 Entrez,  Source | cyclin-dependent kinase 4 | 5582 | 0.600 | 0.1468 | No |
40 | VIPR1 | NA | VIPR1 Entrez,  Source | vasoactive intestinal peptide receptor 1 | 5757 | 0.569 | 0.1440 | No |
41 | IL21 | NA | IL21 Entrez,  Source | interleukin 21 | 6263 | 0.487 | 0.1284 | No |
42 | SERTAD1 | NA | SERTAD1 Entrez,  Source | SERTA domain containing 1 | 6287 | 0.483 | 0.1306 | No |
43 | STAMBP | NA | STAMBP Entrez,  Source | STAM binding protein | 6839 | 0.414 | 0.1129 | No |
44 | CSF1 | NA | CSF1 Entrez,  Source | colony stimulating factor 1 (macrophage) | 6852 | 0.412 | 0.1150 | No |
45 | NCK1 | NA | NCK1 Entrez,  Source | NCK adaptor protein 1 | 6863 | 0.412 | 0.1172 | No |
46 | VIP | NA | VIP Entrez,  Source | vasoactive intestinal peptide | 7019 | 0.395 | 0.1139 | No |
47 | TNFSF4 | NA | TNFSF4 Entrez,  Source | tumor necrosis factor (ligand) superfamily, member 4 (tax-transcriptionally activated glycoprotein 1, 34kDa) | 7480 | 0.346 | 0.0992 | No |
48 | ADRA1D | NA | ADRA1D Entrez,  Source | adrenergic, alpha-1D-, receptor | 8136 | 0.289 | 0.0769 | No |
49 | PRTN3 | NA | PRTN3 Entrez,  Source | proteinase 3 (serine proteinase, neutrophil, Wegener granulomatosis autoantigen) | 8235 | 0.283 | 0.0750 | No |
50 | FGF4 | NA | FGF4 Entrez,  Source | fibroblast growth factor 4 (heparin secretory transforming protein 1, Kaposi sarcoma oncogene) | 8425 | 0.268 | 0.0697 | No |
51 | IL2 | NA | IL2 Entrez,  Source | interleukin 2 | 8575 | 0.258 | 0.0658 | No |
52 | MARK4 | NA | MARK4 Entrez,  Source | MAP/microtubule affinity-regulating kinase 4 | 9072 | 0.226 | 0.0490 | No |
53 | CCKBR | NA | CCKBR Entrez,  Source | cholecystokinin B receptor | 9421 | 0.207 | 0.0375 | No |
54 | AGGF1 | NA | AGGF1 Entrez,  Source | angiogenic factor with G patch and FHA domains 1 | 9721 | 0.192 | 0.0277 | No |
55 | CAPNS1 | NA | CAPNS1 Entrez,  Source | calpain, small subunit 1 | 10130 | 0.173 | 0.0137 | No |
56 | TSHR | NA | TSHR Entrez,  Source | thyroid stimulating hormone receptor | 10137 | 0.173 | 0.0146 | No |
57 | CXCL10 | NA | CXCL10 Entrez,  Source | chemokine (C-X-C motif) ligand 10 | 10692 | 0.147 | -0.0049 | No |
58 | FLT3 | NA | FLT3 Entrez,  Source | fms-related tyrosine kinase 3 | 10714 | 0.146 | -0.0047 | No |
59 | SPDYA | NA | SPDYA Entrez,  Source | speedy homolog A (Drosophila) | 11018 | 0.131 | -0.0151 | No |
60 | FLT1 | NA | FLT1 Entrez,  Source | fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) | 11746 | 0.100 | -0.0412 | No |
61 | TBRG4 | NA | TBRG4 Entrez,  Source | transforming growth factor beta regulator 4 | 11863 | 0.095 | -0.0449 | No |
62 | IL4 | NA | IL4 Entrez,  Source | interleukin 4 | 12003 | 0.090 | -0.0494 | No |
63 | IL12B | NA | IL12B Entrez,  Source | interleukin 12B (natural killer cell stimulatory factor 2, cytotoxic lymphocyte maturation factor 2, p40) | 12329 | 0.078 | -0.0609 | No |
64 | CD28 | NA | CD28 Entrez,  Source | CD28 molecule | 12351 | 0.077 | -0.0612 | No |
65 | FGF10 | NA | FGF10 Entrez,  Source | fibroblast growth factor 10 | 12772 | 0.061 | -0.0763 | No |
66 | IL12RB1 | NA | IL12RB1 Entrez,  Source | interleukin 12 receptor, beta 1 | 13025 | 0.052 | -0.0852 | No |
67 | CDC25B | NA | CDC25B Entrez,  Source | cell division cycle 25B | 13104 | 0.049 | -0.0878 | No |
68 | CCL14 | NA | CCL14 Entrez,  Source | chemokine (C-C motif) ligand 14 | 14052 | 0.013 | -0.1225 | No |
69 | ADRA2A | NA | ADRA2A Entrez,  Source | adrenergic, alpha-2A-, receptor | 14312 | 0.004 | -0.1320 | No |
70 | IL18 | NA | IL18 Entrez,  Source | interleukin 18 (interferon-gamma-inducing factor) | 14572 | -0.005 | -0.1415 | No |
71 | IL3 | NA | IL3 Entrez,  Source | interleukin 3 (colony-stimulating factor, multiple) | 14741 | -0.011 | -0.1477 | No |
72 | ALOX12 | NA | ALOX12 Entrez,  Source | arachidonate 12-lipoxygenase | 15059 | -0.024 | -0.1592 | No |
73 | DERL2 | NA | DERL2 Entrez,  Source | Der1-like domain family, member 2 | 15507 | -0.041 | -0.1754 | No |
74 | MST1R | NA | MST1R Entrez,  Source | macrophage stimulating 1 receptor (c-met-related tyrosine kinase) | 15560 | -0.043 | -0.1770 | No |
75 | IL12RB2 | NA | IL12RB2 Entrez,  Source | interleukin 12 receptor, beta 2 | 15979 | -0.058 | -0.1920 | No |
76 | PTPRC | NA | PTPRC Entrez,  Source | protein tyrosine phosphatase, receptor type, C | 15992 | -0.059 | -0.1921 | No |
77 | HTR1A | NA | HTR1A Entrez,  Source | 5-hydroxytryptamine (serotonin) receptor 1A | 16041 | -0.062 | -0.1935 | No |
78 | CD86 | NA | CD86 Entrez,  Source | CD86 molecule | 16937 | -0.099 | -0.2258 | No |
79 | CD3E | NA | CD3E Entrez,  Source | CD3e molecule, epsilon (CD3-TCR complex) | 17403 | -0.120 | -0.2422 | No |
80 | CUL3 | NA | CUL3 Entrez,  Source | cullin 3 | 18027 | -0.155 | -0.2641 | No |
81 | IL9 | NA | IL9 Entrez,  Source | interleukin 9 | 18039 | -0.155 | -0.2636 | No |
82 | TNFSF13B | NA | TNFSF13B Entrez,  Source | tumor necrosis factor (ligand) superfamily, member 13b | 18160 | -0.162 | -0.2670 | No |
83 | SLAMF1 | NA | SLAMF1 Entrez,  Source | signaling lymphocytic activation molecule family member 1 | 18553 | -0.189 | -0.2802 | No |
84 | HCLS1 | NA | HCLS1 Entrez,  Source | hematopoietic cell-specific Lyn substrate 1 | 18598 | -0.193 | -0.2806 | No |
85 | EBI3 | NA | EBI3 Entrez,  Source | Epstein-Barr virus induced gene 3 | 18886 | -0.216 | -0.2898 | No |
86 | EREG | NA | EREG Entrez,  Source | epiregulin | 19078 | -0.233 | -0.2954 | No |
87 | TIPIN | NA | TIPIN Entrez,  Source | TIMELESS interacting protein | 19273 | -0.249 | -0.3010 | No |
88 | EPGN | NA | 19307 | -0.252 | -0.3007 | No | ||
89 | GLP2R | NA | GLP2R Entrez,  Source | glucagon-like peptide 2 receptor | 19551 | -0.275 | -0.3079 | No |
90 | SSR1 | NA | SSR1 Entrez,  Source | signal sequence receptor, alpha (translocon-associated protein alpha) | 19825 | -0.302 | -0.3161 | No |
91 | FGF18 | NA | FGF18 Entrez,  Source | fibroblast growth factor 18 | 19855 | -0.306 | -0.3152 | No |
92 | TBC1D8 | NA | TBC1D8 Entrez,  Source | TBC1 domain family, member 8 (with GRAM domain) | 20389 | -0.366 | -0.3326 | No |
93 | REG1A | NA | REG1A Entrez,  Source | regenerating islet-derived 1 alpha (pancreatic stone protein, pancreatic thread protein) | 20526 | -0.383 | -0.3352 | No |
94 | SIRPG | NA | SIRPG Entrez,  Source | signal-regulatory protein gamma | 20821 | -0.425 | -0.3434 | No |
95 | ANG | NA | ANG Entrez,  Source | angiogenin, ribonuclease, RNase A family, 5 | 21162 | -0.475 | -0.3529 | No |
96 | DDX11 | NA | DDX11 Entrez,  Source | DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae) | 21615 | -0.554 | -0.3661 | No |
97 | NAMPT | NA | 21680 | -0.566 | -0.3650 | No | ||
98 | NAP1L1 | NA | NAP1L1 Entrez,  Source | nucleosome assembly protein 1-like 1 | 21785 | -0.588 | -0.3651 | No |
99 | RHOG | NA | RHOG Entrez,  Source | ras homolog gene family, member G (rho G) | 22134 | -0.653 | -0.3739 | No |
100 | NME1 | NA | NME1 Entrez,  Source | non-metastatic cells 1, protein (NM23A) expressed in | 22287 | -0.685 | -0.3752 | No |
101 | TNFSF13 | NA | TNFSF13 Entrez,  Source | tumor necrosis factor (ligand) superfamily, member 13 | 22312 | -0.689 | -0.3718 | No |
102 | EGR4 | NA | EGR4 Entrez,  Source | early growth response 4 | 22845 | -0.805 | -0.3864 | No |
103 | FLT3LG | NA | FLT3LG Entrez,  Source | fms-related tyrosine kinase 3 ligand | 22969 | -0.833 | -0.3858 | No |
104 | CDH13 | NA | CDH13 Entrez,  Source | cadherin 13, H-cadherin (heart) | 23118 | -0.862 | -0.3859 | No |
105 | CDC123 | NA | 23182 | -0.874 | -0.3827 | No | ||
106 | FIGF | NA | FIGF Entrez,  Source | c-fos induced growth factor (vascular endothelial growth factor D) | 23302 | -0.902 | -0.3815 | No |
107 | LAMA1 | NA | LAMA1 Entrez,  Source | laminin, alpha 1 | 23715 | -1.011 | -0.3904 | No |
108 | BMI1 | NA | BMI1 Entrez,  Source | B lymphoma Mo-MLV insertion region (mouse) | 23952 | -1.077 | -0.3924 | Yes |
109 | TIMP1 | NA | TIMP1 Entrez,  Source | TIMP metallopeptidase inhibitor 1 | 24033 | -1.098 | -0.3885 | Yes |
110 | CD24 | NA | CD24 Entrez,  Source | CD24 molecule | 24149 | -1.134 | -0.3857 | Yes |
111 | IL31RA | NA | IL31RA Entrez,  Source | interleukin 31 receptor A | 24163 | -1.138 | -0.3791 | Yes |
112 | IL11 | NA | IL11 Entrez,  Source | interleukin 11 | 24169 | -1.140 | -0.3723 | Yes |
113 | LRP5 | NA | LRP5 Entrez,  Source | low density lipoprotein receptor-related protein 5 | 24383 | -1.206 | -0.3726 | Yes |
114 | CSF3 | NA | CSF3 Entrez,  Source | colony stimulating factor 3 (granulocyte) | 24446 | -1.225 | -0.3673 | Yes |
115 | MATK | NA | MATK Entrez,  Source | megakaryocyte-associated tyrosine kinase | 24462 | -1.229 | -0.3602 | Yes |
116 | BTC | NA | BTC Entrez,  Source | betacellulin | 24641 | -1.291 | -0.3587 | Yes |
117 | CAPN1 | NA | CAPN1 Entrez,  Source | calpain 1, (mu/I) large subunit | 25062 | -1.444 | -0.3652 | Yes |
118 | TTK | NA | TTK Entrez,  Source | TTK protein kinase | 25095 | -1.459 | -0.3573 | Yes |
119 | DNAJA2 | NA | DNAJA2 Entrez,  Source | DnaJ (Hsp40) homolog, subfamily A, member 2 | 25155 | -1.485 | -0.3503 | Yes |
120 | MCTS1 | NA | MCTS1 Entrez,  Source | malignant T cell amplified sequence 1 | 25232 | -1.514 | -0.3437 | Yes |
121 | NOP2 | NA | 25418 | -1.600 | -0.3406 | Yes | ||
122 | TGFBR2 | NA | TGFBR2 Entrez,  Source | transforming growth factor, beta receptor II (70/80kDa) | 25434 | -1.610 | -0.3311 | Yes |
123 | TBX3 | NA | TBX3 Entrez,  Source | T-box 3 (ulnar mammary syndrome) | 25487 | -1.638 | -0.3229 | Yes |
124 | TNFSF12 | NA | TNFSF12 Entrez,  Source | tumor necrosis factor (ligand) superfamily, member 12 | 25648 | -1.710 | -0.3182 | Yes |
125 | MYC | NA | MYC Entrez,  Source | v-myc myelocytomatosis viral oncogene homolog (avian) | 25669 | -1.721 | -0.3082 | Yes |
126 | LIF | NA | LIF Entrez,  Source | leukemia inhibitory factor (cholinergic differentiation factor) | 26070 | -1.959 | -0.3108 | Yes |
127 | CTF1 | NA | CTF1 Entrez,  Source | cardiotrophin 1 | 26074 | -1.962 | -0.2987 | Yes |
128 | NME2 | NA | NME2 Entrez,  Source | non-metastatic cells 2, protein (NM23B) expressed in | 26227 | -2.076 | -0.2914 | Yes |
129 | ICOSLG | NA | ICOSLG Entrez,  Source | inducible T-cell co-stimulator ligand | 26404 | -2.216 | -0.2841 | Yes |
130 | FOSL1 | NA | FOSL1 Entrez,  Source | FOS-like antigen 1 | 26452 | -2.259 | -0.2718 | Yes |
131 | TNFRSF11A | NA | TNFRSF11A Entrez,  Source | tumor necrosis factor receptor superfamily, member 11a, NFKB activator | 26627 | -2.414 | -0.2633 | Yes |
132 | PGF | NA | PGF Entrez,  Source | placental growth factor, vascular endothelial growth factor-related protein | 26662 | -2.458 | -0.2493 | Yes |
133 | PTHLH | NA | PTHLH Entrez,  Source | parathyroid hormone-like hormone | 26693 | -2.489 | -0.2349 | Yes |
134 | FGFR1OP | NA | FGFR1OP Entrez,  Source | FGFR1 oncogene partner | 26702 | -2.508 | -0.2196 | Yes |
135 | HOXC10 | NA | HOXC10 Entrez,  Source | homeobox C10 | 26784 | -2.614 | -0.2064 | Yes |
136 | TCIRG1 | NA | TCIRG1 Entrez,  Source | T-cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 subunit A3 | 26835 | -2.712 | -0.1914 | Yes |
137 | CD47 | NA | CD47 Entrez,  Source | CD47 molecule | 26900 | -2.809 | -0.1763 | Yes |
138 | NRP1 | NA | NRP1 Entrez,  Source | neuropilin 1 | 26913 | -2.831 | -0.1592 | Yes |
139 | IL15 | NA | IL15 Entrez,  Source | interleukin 15 | 26930 | -2.867 | -0.1420 | Yes |
140 | IL7 | NA | IL7 Entrez,  Source | interleukin 7 | 26962 | -2.930 | -0.1249 | Yes |
141 | FLT4 | NA | FLT4 Entrez,  Source | fms-related tyrosine kinase 4 | 26982 | -2.982 | -0.1071 | Yes |
142 | LYN | NA | LYN Entrez,  Source | v-yes-1 Yamaguchi sarcoma viral related oncogene homolog | 27040 | -3.155 | -0.0897 | Yes |
143 | EGFR | NA | EGFR Entrez,  Source | epidermal growth factor receptor (erythroblastic leukemia viral (v-erb-b) oncogene homolog, avian) | 27106 | -3.388 | -0.0710 | Yes |
144 | CXCL5 | NA | CXCL5 Entrez,  Source | chemokine (C-X-C motif) ligand 5 | 27183 | -3.696 | -0.0509 | Yes |
145 | SPHK1 | NA | SPHK1 Entrez,  Source | sphingosine kinase 1 | 27260 | -4.236 | -0.0274 | Yes |
146 | BNC1 | NA | BNC1 Entrez,  Source | basonuclin 1 | 27321 | -4.815 | 0.0003 | Yes |